3D Mol Viewer

Visualization is a key aspect of molecular modeling. It helps to understand the structure of molecules and their properties.

You can use this tool to open PDB, MOL, and SDF files on your computer and view them in 3D.

See also

• Molecule of the Day - Discover a new molecule every day.
• SMILES to Structure - Convert SMILES (simplified molecular-input line-entry system) to a structure online.
• SMILES to Structure API - A web service for converting SMILES (simplified molecular-input line-entry system) to MOL.
• Canonical SMILES Generator - Convert a SMILES string to its canonical (kekulized) form.
• IUPAC Multiplicative Prefix Generator - Generate IUPAC multiplicative prefixes for naming chemical compounds.
• SMILES to IUPAC - Convert SMILES to IUPAC name online.
• IUPAC to SMILES - Convert IUPAC names to SMILES strings.
• IUPAC to Structure - Convert IUPAC names to 2D structures.
• SMILES to InChI - Convert SMILES to InChI string online.
• InChIKey to SMILES - An online tool for converting (resolving) InChIKeys to SMILES strings.
• PDB to FASTA - Extract protein/nucleotide sequences from PDB files.
• SMILES Parse Tree Viewer - Visualize the parse tree of a SMILES string.
• Structural Formula Viewer - View structural formulas of chemical compounds.
• Working with ChemDraw JS - ChemDraw JS makes it possible to create, view, and edit chemical structures in the browser.
• SMILES to 3D Structure (SMILES to Conformer) - Convert SMILES (simplified molecular-input line-entry system) to a 3D structure online.
• Cheminformatics Crossword - A daily crossword puzzle for cheminformatics terms.
• PDB Editor - A simple online editor for Protein Data Bank (PDB) files.
• Mol Editor - A simple online editor for Mol files.
• Awesome SMILES - A curated list of awesome links, tutorials, and resources on SMILES (simplified molecular-input line-entry system).
• Awesome cheminformatics - A curated list of awesome cheminformatics resources.
• Awesome ChemDraw - A curated list of awesome ChemDraw resources, tutorials, and more.
• Periodic Table Crossword - A daily crossword puzzle for chemical elements.
• Chemical Engineering Crossword - A daily crossword puzzle for chemical engineering terms.
• Organic Chemistry Crossword - A daily crossword puzzle for organic chemistry terms.